MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
2_2BalbC1BO2_S2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 224
bases: 2,332,310 bps
CDS: 2,313
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,381
Total number of protein coding genes annotated/found:
2,313
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5054|JADGLU010000065.1
SEQF5054_00692
Genome Viewer
NA
AA
417/139
71-487
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00693
Genome Viewer
NA
AA
729/243
530-1258
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00694
Genome Viewer
NA
AA
1251/417
1255-2505
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00695
Genome Viewer
NA
AA
975/325
2582-3556
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase
SEQF5054|JADGLU010000065.1
SEQF5054_00697
Genome Viewer
NA
AA
441/147
3744-4184
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00698
Genome Viewer
NA
AA
579/193
4384-4962
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00699
Genome Viewer
NA
AA
1395/465
4959-6353
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00700
Genome Viewer
NA
AA
858/286
6334-7191
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00701
Genome Viewer
NA
AA
2712/904
7178-9889
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00702
Genome Viewer
NA
AA
471/157
10091-10561
Transcriptional regulator CtsR
SEQF5054|JADGLU010000065.1
SEQF5054_00703
Genome Viewer
NA
AA
2493/831
10580-13072
ATP-dependent Clp protease ATP-binding subunit ClpC
SEQF5054|JADGLU010000065.1
SEQF5054_00704
Genome Viewer
NA
AA
1101/367
13322-14422
ATP-dependent zinc metalloprotease FtsH
SEQF5054|JADGLU010000065.1
SEQF5054_00705
Genome Viewer
NA
AA
2304/768
14424-16727
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00706
Genome Viewer
NA
AA
1200/400
17083-18282
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00707
Genome Viewer
NA
AA
1464/488
19809-18346
Nucleotide-binding protein ExpZ
SEQF5054|JADGLU010000065.1
SEQF5054_00708
Genome Viewer
NA
AA
564/188
20595-20032
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00709
Genome Viewer
NA
AA
246/82
20844-21089
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00710
Genome Viewer
NA
AA
303/101
21390-21692
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00711
Genome Viewer
NA
AA
123/41
22022-21900
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00712
Genome Viewer
NA
AA
372/124
22268-22639
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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